Analysis of brain network dynamics estimated from fMRI data: A new framework based on communicability and flow.
M. Gilson, N. Kouvaris, G. Deco, Jean-François Mangin, Cyril Poupon, Sandrine Lefranc, Denis Rivière and G. Zamora-López. bioRxiv (2018).
Framework based on communicability and flow to analyze network dynamics.
M. Gilson, N. Kouvaris, G. Deco and G. Zamora-López. Phys. Rev. E 97, 052301 (2018).
Pre-print version. arXiv:1712.05693v2
How structure sculpts function: unveiling the contribution of anatomical connectivity to the brain's spontaneous correlation structure
R.G. Bettinardi, G. Deco, V.M. Karlaftis, T.J. Van Hartevelt, H.M. Fernandes, Z. Kourtzi, M. Kringelbach and G. Zamora-López. Chaos 27, 047409 (2017).
Functional complexity emerging from anatomical constraints in the brain: the significance of network modularity and rich-clubs.
G. Zamora-López, Y. Chen, G. Deco, M.L. Kringelbach and C.S. Zhou. Sci. Reps. 6:38424 (2016).
Chimera-like States in Modular Neural Networks.
J. Hizanidis, N.E. Kouvaris, G. Zamora-López, A. Díaz-Guilera and C.G. Antanopoulos. Sci. Reps. 6:19845 (2016).
Individual node's contribution to the mesoscale of complex networks.
F. Klimm, J. Borge-Holthoeffer, N. Wessel, J. Kurths and G. Zamora-López. New J. Physics 16:125006 (2014).
Order Patterns Networks (ORPAN) - a method to estimate time-evolving functional connectivity from multivariate time series.
S. Schinkel, G. Zamora-López, O. Dimingen, W. Sommer and J. Kurths. Front. Comput. Neurosci. 6:91 (2012).
Phase synchronization of bursting neurons in clustered small-world networks.
C.A.S. Batista, E.L. Lameu, A.M. Batista, S.R. Lopes, T. Pereira, G. Zamora-López, J. Kurths and R. L. Viana. Phys. Rev. E 86, 016211 (2012).
Characterising the complexity of brain and mind networks.
G. Zamora-López, E. Russo, P.M. Gleiser, C.S. Zhou and J. Kurths. Phil. Trans. R. Soc. A 369, 3747 (2011).
Exploring brain function from anatomical connectivity.
G. Zamora-López, C.S. Zhou and J. Kurths. Front. Neurosci. 5, 83 (2011).
Functional network analysis reveals differences in the semantic priming task.
S. Schinkel, G. Zamora-López, O. Dimingen, W. Sommer and J. Kurths. J. Neurosci. Meth. 197, 333-339 (2011).
From modular to centralized organization of synchronization in functional areas of the cat cerebral cortex.
J. Gómez-Gardeñes, G. Zamora-López, Y. Moreno and A. Arenas. PLoS ONE 5(8), e12313 (2010).
Optimal map of the modular structure of complex networks.
A. Arenas, J. Borge-Holthöfer, S. Gómez and G. Zamora-López. New J. Phys. 12, 053009 (2010).
Simulation of large-scale cortical networks by use of individual neuron dynamics.
G. Schmidt, G. Zamora-López and J. Kurths. Int. J. Bifurcation and Chaos 20,
859-867 (2010). PDF
Cortical hubs form a module for multisensory integration on top of the hierarchy of cortical networks.
G. Zamora-López, C.S. Zhou, J. Kurths. Front. Neuroinform. 4:1 (2010). (Open access PDF).
This paper is part of the Focus Issue "Hierarchy and Dynamics in neural networks".
Graph analysis of cortical networks reveals complex anatomical communication substrate.
G. Zamora-López, C.S. Zhou and J. Kurths. CHAOS 19, 015117 (2009).
This paper is part of the Focus Issue "Nonlinear dynamics in cognitive and neural systems".
The generation of random directed networks with prescribed 1-node and 2-node degree correlations.
G. Zamora-López, C.S. Zhou, V. Zlatic and J. Kurths. J. Phys. A 41 224006 (2008).
This paper is part of the Special Issue "Complex Networks: from biology to information technology".
Complex brain networks: From topological communities to clustered dynamics.
L. Zemanová, G. Zamora-López, C.S. Zhou and J. Kurths. Pramana - J. Phys. 70(6), 1087 - 1097 (2008).
Reciprocity of networks with degree correlations and arbitrary degree distribution.
G. Zamora-López, V. Zlatic, C.S. Zhou, H. Štefancic and J. Kurths. Phys.Rev. E 77, 016106 (2008).
Structure-Function Relationship in Complex Brain Networks Expressed by Hierarchical Synchronization.
C.S. Zhou, L. Zemanová, G. Zamora-López, C.C. Hilgetag and J. Kurths, New J. Phys. 9 178 (2007).
This paper is part of the Special Issue Focus on Networked Systems: Theory and Applications.
Hierarchical organization unveiled by functional connectivity in complex brain networks.
C.S. Zhou, L. Zemanová, G. Zamora, C.C. Hilgetag and J. Kurths, Phys. Rev. Lett. 97, 238103 (2006).
Book Chapters, Thesis, etc.
Linking Structure and Function of Complex Cortical Networks.
G. Zamora-López. Ph.D. Thesis, University of Potsdam, Germany (2009).
Structural Characterisation of Networks.
G. Zamora-López, C.S. Zhou and J. Kurths. In "Lectures in Supercomputational Neuroscience: Dynamics in Complex Brain Networks." Edited by P. beim Graben, C.S. Zhou, M. Thiel and J. Kurths. Springer, Berlin (2008).
Series: Understanding Complex Systems. ISBN: 978-3-540-73158-0.
Parallel computation of large neuronal networks with structured connectivity.
Several authors. In "Lectures in Supercomputational Neuroscience: Dynamics in Complex Brain Networks." Edited by P. beim Graben, C.S. Zhou, M. Thiel and J. Kurths. Springer, Berlin (2008).
Series: Understanding Complex Systems. ISBN: 978-3-540-73158-0.
Global Properties of Networks
R. Steuer and G. Zamora-López. In "Analysis of Biological Networks." Edited by B. H. Junker and F. Schreiber, Wiley, Hoboken, New Jersey, USA (2008).
Wiley series on Bioniformatics, Computational Techniques and Engineering. ISBN: 978-0-470-04144-4.
Selected conference posters
GAlib: a library for graph analysis in Python / NumPy.
G. Zamora-López. Presented at the ECCS Conference, September 2013, Barcelona (Spain).
From worms to humans: common principles of large-scale organization in the nervous system.
G. Zamora-López, C.S. Zhou and J. Kurths. Presented at the BCCN Conference, September 2011, Gottingen (Germany).
Recurrent brain states in single-trial EEG during evoked responses.
G. Zamora-López, S. Schinkel and J. Kurths. Presented at the SAN Conference, April 2011, Thessaloniki (Greece).
Significance of Graph measures and Determinism in Random Networks.
G. Zamora-López, V. Zlatic, C.S. Zhou and J. Kurths. Presented at the BCNet workshop, December 2008, Barcelona (Spain).
Structural and Functional Integration in the Cat Cerebral Cortex.
G. Zamora, CS. Zhou, J. Kurths. Presented at DYONET 06, February 2006, Dresden (Germnany).
Cerebral Cortex: A Network Theoretical Approach.
G. Zamora, C.S. Zhou, J. Kurths. Presented at DYBIO 05, 20th June - 15th July 2005, Dresden (Germany).
Poster award of the conference, my first public presentation of cortical hubs forming a rich-club.